Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.67■□□□□ 0.42
OPHN1O60890 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
OPHN1O60890 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
OPHN1O60890 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
OPHN1O60890 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.66■□□□□ 0.42
OPHN1O60890 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.66■□□□□ 0.42
OPHN1O60890 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.66■□□□□ 0.42
OPHN1O60890 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
OPHN1O60890 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.66■□□□□ 0.42
OPHN1O60890 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.66■□□□□ 0.42
OPHN1O60890 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 AC025062.2-201ENST00000605477 670 ntBASIC17.66■□□□□ 0.42
OPHN1O60890 AP000867.4-201ENST00000641616 219 ntBASIC17.66■□□□□ 0.42
OPHN1O60890 AC134684.3-201ENST00000641758 218 ntBASIC17.66■□□□□ 0.42
OPHN1O60890 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
OPHN1O60890 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 AC092053.1-201ENST00000605787 1936 ntBASIC17.66■□□□□ 0.42
OPHN1O60890 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
OPHN1O60890 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.66■□□□□ 0.42
OPHN1O60890 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.66■□□□□ 0.42
OPHN1O60890 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.66■□□□□ 0.42
OPHN1O60890 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
OPHN1O60890 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
OPHN1O60890 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.65■□□□□ 0.42
OPHN1O60890 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.65■□□□□ 0.42
OPHN1O60890 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
OPHN1O60890 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
OPHN1O60890 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.65■□□□□ 0.42
OPHN1O60890 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
OPHN1O60890 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
OPHN1O60890 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
OPHN1O60890 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.65■□□□□ 0.42
OPHN1O60890 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.65■□□□□ 0.42
OPHN1O60890 AC002347.1-201ENST00000569543 541 ntBASIC17.65■□□□□ 0.42
OPHN1O60890 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
OPHN1O60890 AC011676.5-201ENST00000624864 2660 ntBASIC17.65■□□□□ 0.42
OPHN1O60890 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
OPHN1O60890 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.65■□□□□ 0.42
OPHN1O60890 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.65■□□□□ 0.42
OPHN1O60890 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.65■□□□□ 0.42
OPHN1O60890 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
OPHN1O60890 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
OPHN1O60890 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
OPHN1O60890 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
OPHN1O60890 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
OPHN1O60890 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.64■□□□□ 0.42
OPHN1O60890 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
OPHN1O60890 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.64■□□□□ 0.42
OPHN1O60890 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
OPHN1O60890 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
OPHN1O60890 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OPHN1O60890 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
OPHN1O60890 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.64■□□□□ 0.41
OPHN1O60890 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OPHN1O60890 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
OPHN1O60890 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.64■□□□□ 0.41
OPHN1O60890 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.64■□□□□ 0.41
OPHN1O60890 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms