Protein–RNA interactions for Protein: O60565

GREM1, Gremlin-1, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GREM1O60565 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.1■□□□□ 0.33
GREM1O60565 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GREM1O60565 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.1■□□□□ 0.33
GREM1O60565 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
GREM1O60565 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GREM1O60565 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GREM1O60565 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.1■□□□□ 0.33
GREM1O60565 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 AC105020.1-201ENST00000435356 2205 ntBASIC17.09■□□□□ 0.33
GREM1O60565 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
GREM1O60565 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 KLF2P3-201ENST00000451977 1087 ntBASIC17.09■□□□□ 0.33
GREM1O60565 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.09■□□□□ 0.33
GREM1O60565 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.09■□□□□ 0.33
GREM1O60565 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.09■□□□□ 0.33
GREM1O60565 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.09■□□□□ 0.33
GREM1O60565 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.09■□□□□ 0.33
GREM1O60565 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 AP3S2-216ENST00000617003 1561 ntBASIC17.09■□□□□ 0.33
GREM1O60565 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 AL603756.1-201ENST00000606511 2163 ntBASIC17.09■□□□□ 0.33
GREM1O60565 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.09■□□□□ 0.33
GREM1O60565 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GREM1O60565 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.08■□□□□ 0.33
GREM1O60565 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
GREM1O60565 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GREM1O60565 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GREM1O60565 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GREM1O60565 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.08■□□□□ 0.33
GREM1O60565 AC005915.1-201ENST00000624912 2018 ntBASIC17.08■□□□□ 0.33
GREM1O60565 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.08■□□□□ 0.33
GREM1O60565 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
GREM1O60565 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.08■□□□□ 0.33
GREM1O60565 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
GREM1O60565 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GREM1O60565 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
GREM1O60565 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GREM1O60565 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GREM1O60565 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GREM1O60565 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.08■□□□□ 0.32
GREM1O60565 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.08■□□□□ 0.32
GREM1O60565 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.08■□□□□ 0.32
GREM1O60565 BCRP1-201ENST00000444246 691 ntBASIC17.08■□□□□ 0.32
GREM1O60565 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.08■□□□□ 0.32
GREM1O60565 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.08■□□□□ 0.32
GREM1O60565 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.08■□□□□ 0.32
GREM1O60565 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.08■□□□□ 0.32
GREM1O60565 RARRES2P9-201ENST00000565168 469 ntBASIC17.08■□□□□ 0.32
GREM1O60565 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.08■□□□□ 0.32
GREM1O60565 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.08■□□□□ 0.32
GREM1O60565 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GREM1O60565 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
GREM1O60565 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GREM1O60565 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GREM1O60565 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GREM1O60565 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GREM1O60565 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GREM1O60565 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
GREM1O60565 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GREM1O60565 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GREM1O60565 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.07■□□□□ 0.32
GREM1O60565 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GREM1O60565 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.07■□□□□ 0.32
GREM1O60565 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GREM1O60565 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GREM1O60565 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GREM1O60565 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GREM1O60565 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.07■□□□□ 0.32
GREM1O60565 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GREM1O60565 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GREM1O60565 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GREM1O60565 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
GREM1O60565 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.07■□□□□ 0.32
GREM1O60565 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GREM1O60565 SPDYE7P-202ENST00000420373 878 ntBASIC17.07■□□□□ 0.32
GREM1O60565 AC055876.3-201ENST00000431496 288 ntBASIC17.07■□□□□ 0.32
GREM1O60565 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.07■□□□□ 0.32
GREM1O60565 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GREM1O60565 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.07■□□□□ 0.32
GREM1O60565 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.07■□□□□ 0.32
GREM1O60565 LINC02084-201ENST00000606069 1096 ntBASIC17.07■□□□□ 0.32
GREM1O60565 AL096865.1-201ENST00000606796 927 ntBASIC17.07■□□□□ 0.32
GREM1O60565 AC138649.4-201ENST00000612222 287 ntBASIC17.07■□□□□ 0.32
GREM1O60565 AL031731.1-201ENST00000642131 2094 ntBASIC17.07■□□□□ 0.32
GREM1O60565 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GREM1O60565 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms