Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
FOXS1O43638 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.82■□□□□ 0.12
FOXS1O43638 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXS1O43638 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
FOXS1O43638 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
FOXS1O43638 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
FOXS1O43638 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
FOXS1O43638 AC138932.1-201ENST00000534164 6830 ntBASIC15.81■□□□□ 0.12
FOXS1O43638 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
FOXS1O43638 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
FOXS1O43638 KRT8P39-201ENST00000396270 1433 ntBASIC15.81■□□□□ 0.12
FOXS1O43638 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 RNF216P1-203ENST00000404404 2427 ntBASIC15.81■□□□□ 0.12
FOXS1O43638 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.81■□□□□ 0.12
FOXS1O43638 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.81■□□□□ 0.12
FOXS1O43638 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.81■□□□□ 0.12
FOXS1O43638 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
FOXS1O43638 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
FOXS1O43638 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
FOXS1O43638 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.81■□□□□ 0.12
FOXS1O43638 AL161645.1-201ENST00000622716 1255 ntBASIC15.81■□□□□ 0.12
FOXS1O43638 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXS1O43638 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.81■□□□□ 0.12
FOXS1O43638 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.81■□□□□ 0.12
FOXS1O43638 AL139011.1-202ENST00000642063 584 ntBASIC15.81■□□□□ 0.12
FOXS1O43638 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
FOXS1O43638 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXS1O43638 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 AL603756.1-201ENST00000606511 2163 ntBASIC15.8■□□□□ 0.12
FOXS1O43638 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXS1O43638 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
FOXS1O43638 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXS1O43638 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXS1O43638 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXS1O43638 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
FOXS1O43638 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXS1O43638 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
FOXS1O43638 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
FOXS1O43638 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXS1O43638 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
FOXS1O43638 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXS1O43638 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXS1O43638 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXS1O43638 AP001160.2-201ENST00000596071 487 ntBASIC15.8■□□□□ 0.12
FOXS1O43638 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXS1O43638 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 AC105339.1-204ENST00000636249 355 ntBASIC15.8■□□□□ 0.12
FOXS1O43638 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
FOXS1O43638 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 AC078925.2-201ENST00000624013 1973 ntBASIC15.8■□□□□ 0.12
FOXS1O43638 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXS1O43638 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
FOXS1O43638 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
FOXS1O43638 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXS1O43638 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXS1O43638 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXS1O43638 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FOXS1O43638 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXS1O43638 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
FOXS1O43638 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms