Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HOXA2O43364 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA2O43364 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA2O43364 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HOXA2O43364 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HOXA2O43364 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA2O43364 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA2O43364 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA2O43364 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXA2O43364 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HOXA2O43364 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.93■□□□□ 0.46
HOXA2O43364 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA2O43364 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA2O43364 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA2O43364 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA2O43364 MIR661-201ENST00000384842 89 ntBASIC17.93■□□□□ 0.46
HOXA2O43364 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
HOXA2O43364 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXA2O43364 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HOXA2O43364 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXA2O43364 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA2O43364 HLA-V-204ENST00000476601 1289 ntBASIC17.93■□□□□ 0.46
HOXA2O43364 AC004890.2-204ENST00000481968 304 ntBASIC17.93■□□□□ 0.46
HOXA2O43364 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HOXA2O43364 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXA2O43364 AC009118.2-201ENST00000613275 655 ntBASIC17.93■□□□□ 0.46
HOXA2O43364 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.93■□□□□ 0.46
HOXA2O43364 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA2O43364 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HOXA2O43364 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA2O43364 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA2O43364 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.93■□□□□ 0.46
HOXA2O43364 AC063926.2-201ENST00000623766 1308 ntBASIC17.93■□□□□ 0.46
HOXA2O43364 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
HOXA2O43364 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HOXA2O43364 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.93■□□□□ 0.46
HOXA2O43364 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HOXA2O43364 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA2O43364 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXA2O43364 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA2O43364 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA2O43364 AC100757.3-201ENST00000622361 1406 ntBASIC17.92■□□□□ 0.46
HOXA2O43364 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HOXA2O43364 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA2O43364 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA2O43364 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXA2O43364 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.92■□□□□ 0.46
HOXA2O43364 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXA2O43364 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.92■□□□□ 0.46
HOXA2O43364 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.92■□□□□ 0.46
HOXA2O43364 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HOXA2O43364 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXA2O43364 AC027307.3-201ENST00000594262 1100 ntBASIC17.92■□□□□ 0.46
HOXA2O43364 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXA2O43364 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.92■□□□□ 0.46
HOXA2O43364 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HOXA2O43364 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA2O43364 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA2O43364 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.92■□□□□ 0.46
HOXA2O43364 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HOXA2O43364 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA2O43364 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA2O43364 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HOXA2O43364 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA2O43364 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HOXA2O43364 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HOXA2O43364 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXA2O43364 AC006277.1-201ENST00000624348 1610 ntBASIC17.91■□□□□ 0.46
HOXA2O43364 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HOXA2O43364 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.91■□□□□ 0.46
HOXA2O43364 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 FAM220BP-201ENST00000377689 816 ntBASIC17.91■□□□□ 0.46
HOXA2O43364 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.91■□□□□ 0.46
HOXA2O43364 AC005034.1-201ENST00000426657 489 ntBASIC17.91■□□□□ 0.46
HOXA2O43364 AC244107.1-201ENST00000442033 332 ntBASIC17.91■□□□□ 0.46
HOXA2O43364 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.91■□□□□ 0.46
HOXA2O43364 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXA2O43364 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.91■□□□□ 0.46
HOXA2O43364 AC005225.4-201ENST00000557330 545 ntBASIC17.91■□□□□ 0.46
HOXA2O43364 AC012645.4-201ENST00000610691 1061 ntBASIC17.91■□□□□ 0.46
HOXA2O43364 AL590560.3-201ENST00000623350 461 ntBASIC17.91■□□□□ 0.46
HOXA2O43364 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HOXA2O43364 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HOXA2O43364 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HOXA2O43364 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HOXA2O43364 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HOXA2O43364 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms