Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RIPK2O43353 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.17■□□□□ 0.34
RIPK2O43353 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RIPK2O43353 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.17■□□□□ 0.34
RIPK2O43353 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.17■□□□□ 0.34
RIPK2O43353 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.17■□□□□ 0.34
RIPK2O43353 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RIPK2O43353 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RIPK2O43353 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RIPK2O43353 AC090616.6-201ENST00000582640 721 ntBASIC17.17■□□□□ 0.34
RIPK2O43353 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RIPK2O43353 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.17■□□□□ 0.34
RIPK2O43353 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RIPK2O43353 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.17■□□□□ 0.34
RIPK2O43353 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.17■□□□□ 0.34
RIPK2O43353 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.17■□□□□ 0.34
RIPK2O43353 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RIPK2O43353 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RIPK2O43353 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RIPK2O43353 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.17■□□□□ 0.34
RIPK2O43353 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.16■□□□□ 0.34
RIPK2O43353 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.16■□□□□ 0.34
RIPK2O43353 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.16■□□□□ 0.34
RIPK2O43353 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RIPK2O43353 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.16■□□□□ 0.34
RIPK2O43353 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.16■□□□□ 0.34
RIPK2O43353 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RIPK2O43353 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.16■□□□□ 0.34
RIPK2O43353 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 IGHV3-41-201ENST00000613121 348 ntBASIC17.16■□□□□ 0.34
RIPK2O43353 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.16■□□□□ 0.34
RIPK2O43353 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RIPK2O43353 AC148477.5-201ENST00000625164 1645 ntBASIC17.16■□□□□ 0.34
RIPK2O43353 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RIPK2O43353 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.16■□□□□ 0.34
RIPK2O43353 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.16■□□□□ 0.34
RIPK2O43353 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.16■□□□□ 0.34
RIPK2O43353 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RIPK2O43353 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RIPK2O43353 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RIPK2O43353 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RIPK2O43353 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.15■□□□□ 0.34
RIPK2O43353 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.15■□□□□ 0.34
RIPK2O43353 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.15■□□□□ 0.34
RIPK2O43353 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RIPK2O43353 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RIPK2O43353 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RIPK2O43353 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RIPK2O43353 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.15■□□□□ 0.34
RIPK2O43353 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.15■□□□□ 0.34
RIPK2O43353 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.15■□□□□ 0.34
RIPK2O43353 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RIPK2O43353 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.15■□□□□ 0.34
RIPK2O43353 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RIPK2O43353 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.15■□□□□ 0.34
RIPK2O43353 AL645929.1-201ENST00000420084 975 ntBASIC17.15■□□□□ 0.34
RIPK2O43353 AC246785.2-201ENST00000432512 513 ntBASIC17.15■□□□□ 0.34
RIPK2O43353 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.15■□□□□ 0.34
RIPK2O43353 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RIPK2O43353 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.15■□□□□ 0.34
RIPK2O43353 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.15■□□□□ 0.34
RIPK2O43353 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.15■□□□□ 0.34
RIPK2O43353 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.15■□□□□ 0.34
RIPK2O43353 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.15■□□□□ 0.34
RIPK2O43353 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RIPK2O43353 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RIPK2O43353 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RIPK2O43353 GGT4P-201ENST00000623672 1708 ntBASIC17.15■□□□□ 0.34
RIPK2O43353 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.15■□□□□ 0.34
RIPK2O43353 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RIPK2O43353 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RIPK2O43353 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.15■□□□□ 0.34
RIPK2O43353 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RIPK2O43353 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.15■□□□□ 0.34
RIPK2O43353 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RIPK2O43353 AC144831.1-201ENST00000573312 2656 ntBASIC17.14■□□□□ 0.34
RIPK2O43353 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.34
RIPK2O43353 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.34
RIPK2O43353 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.14■□□□□ 0.34
RIPK2O43353 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RIPK2O43353 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms