Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEMA3EO15041 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
SEMA3EO15041 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA3EO15041 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA3EO15041 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.19■□□□□ 0.82
SEMA3EO15041 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA3EO15041 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA3EO15041 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA3EO15041 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA3EO15041 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.19■□□□□ 0.82
SEMA3EO15041 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA3EO15041 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SEMA3EO15041 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA3EO15041 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA3EO15041 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.19■□□□□ 0.82
SEMA3EO15041 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.19■□□□□ 0.82
SEMA3EO15041 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA3EO15041 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.19■□□□□ 0.82
SEMA3EO15041 AC120057.1-201ENST00000483947 663 ntBASIC20.19■□□□□ 0.82
SEMA3EO15041 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA3EO15041 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.19■□□□□ 0.82
SEMA3EO15041 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.19■□□□□ 0.82
SEMA3EO15041 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.19■□□□□ 0.82
SEMA3EO15041 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA3EO15041 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SEMA3EO15041 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
SEMA3EO15041 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.19■□□□□ 0.82
SEMA3EO15041 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.19■□□□□ 0.82
SEMA3EO15041 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SEMA3EO15041 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.19■□□□□ 0.82
SEMA3EO15041 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEMA3EO15041 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.19■□□□□ 0.82
SEMA3EO15041 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.19■□□□□ 0.82
SEMA3EO15041 AL671710.1-201ENST00000610245 2349 ntBASIC20.19■□□□□ 0.82
SEMA3EO15041 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SEMA3EO15041 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.18■□□□□ 0.82
SEMA3EO15041 AC139713.2-201ENST00000641328 2723 ntBASIC20.18■□□□□ 0.82
SEMA3EO15041 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
SEMA3EO15041 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.18■□□□□ 0.82
SEMA3EO15041 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.18■□□□□ 0.82
SEMA3EO15041 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SEMA3EO15041 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.18■□□□□ 0.82
SEMA3EO15041 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.18■□□□□ 0.82
SEMA3EO15041 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SEMA3EO15041 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SEMA3EO15041 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.18■□□□□ 0.82
SEMA3EO15041 TUBB3P1-201ENST00000405796 1332 ntBASIC20.18■□□□□ 0.82
SEMA3EO15041 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SEMA3EO15041 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.18■□□□□ 0.82
SEMA3EO15041 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SEMA3EO15041 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA3EO15041 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA3EO15041 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SEMA3EO15041 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA3EO15041 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SEMA3EO15041 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA3EO15041 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA3EO15041 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.17■□□□□ 0.82
SEMA3EO15041 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA3EO15041 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA3EO15041 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA3EO15041 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA3EO15041 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.17■□□□□ 0.82
SEMA3EO15041 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA3EO15041 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.17■□□□□ 0.82
SEMA3EO15041 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA3EO15041 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA3EO15041 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SEMA3EO15041 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.17■□□□□ 0.82
SEMA3EO15041 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA3EO15041 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA3EO15041 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SEMA3EO15041 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SEMA3EO15041 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SEMA3EO15041 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.17■□□□□ 0.82
SEMA3EO15041 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.17■□□□□ 0.82
SEMA3EO15041 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEMA3EO15041 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.16■□□□□ 0.82
SEMA3EO15041 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.16■□□□□ 0.82
SEMA3EO15041 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEMA3EO15041 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SEMA3EO15041 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms