Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP3B1O00203 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.06■□□□□ 0.32
AP3B1O00203 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
AP3B1O00203 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
AP3B1O00203 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
AP3B1O00203 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
AP3B1O00203 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
AP3B1O00203 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.06■□□□□ 0.32
AP3B1O00203 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
AP3B1O00203 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.06■□□□□ 0.32
AP3B1O00203 PTCHD3P3-201ENST00000403073 906 ntBASIC17.06■□□□□ 0.32
AP3B1O00203 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
AP3B1O00203 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.06■□□□□ 0.32
AP3B1O00203 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 AC087163.2-201ENST00000457299 853 ntBASIC17.06■□□□□ 0.32
AP3B1O00203 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.06■□□□□ 0.32
AP3B1O00203 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.06■□□□□ 0.32
AP3B1O00203 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.06■□□□□ 0.32
AP3B1O00203 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.06■□□□□ 0.32
AP3B1O00203 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.06■□□□□ 0.32
AP3B1O00203 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.06■□□□□ 0.32
AP3B1O00203 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 AC107918.4-202ENST00000641623 219 ntBASIC17.06■□□□□ 0.32
AP3B1O00203 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.06■□□□□ 0.32
AP3B1O00203 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.06■□□□□ 0.32
AP3B1O00203 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP3B1O00203 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
AP3B1O00203 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3B1O00203 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
AP3B1O00203 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
AP3B1O00203 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
AP3B1O00203 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.05■□□□□ 0.32
AP3B1O00203 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.05■□□□□ 0.32
AP3B1O00203 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.05■□□□□ 0.32
AP3B1O00203 MPDU1-223ENST00000582151 728 ntBASIC17.05■□□□□ 0.32
AP3B1O00203 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.05■□□□□ 0.32
AP3B1O00203 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
AP3B1O00203 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
AP3B1O00203 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3B1O00203 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3B1O00203 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
AP3B1O00203 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.04■□□□□ 0.32
AP3B1O00203 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
AP3B1O00203 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3B1O00203 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
AP3B1O00203 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3B1O00203 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3B1O00203 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.04■□□□□ 0.32
AP3B1O00203 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3B1O00203 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.04■□□□□ 0.32
AP3B1O00203 AC021087.4-201ENST00000563761 564 ntBASIC17.04■□□□□ 0.32
AP3B1O00203 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
AP3B1O00203 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms