Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCA1A8K7I4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCA1A8K7I4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CLCA1A8K7I4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCA1A8K7I4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCA1A8K7I4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CLCA1A8K7I4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCA1A8K7I4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCA1A8K7I4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCA1A8K7I4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.83■□□□□ 0.13
CLCA1A8K7I4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCA1A8K7I4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CLCA1A8K7I4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.83■□□□□ 0.13
CLCA1A8K7I4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.83■□□□□ 0.13
CLCA1A8K7I4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLCA1A8K7I4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCA1A8K7I4 AC093525.9-201ENST00000624961 1746 ntBASIC15.83■□□□□ 0.13
CLCA1A8K7I4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCA1A8K7I4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 AC007950.2-201ENST00000615045 2347 ntBASIC15.83■□□□□ 0.12
CLCA1A8K7I4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLCA1A8K7I4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 COX5BP2-201ENST00000392354 334 ntBASIC15.82■□□□□ 0.12
CLCA1A8K7I4 AL590627.1-203ENST00000421194 1026 ntBASIC15.82■□□□□ 0.12
CLCA1A8K7I4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 RNPS1P1-201ENST00000507437 918 ntBASIC15.82■□□□□ 0.12
CLCA1A8K7I4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 AP001005.1-201ENST00000571755 1248 ntBASIC15.82■□□□□ 0.12
CLCA1A8K7I4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 AL139327.4-201ENST00000612362 153 ntBASIC15.82■□□□□ 0.12
CLCA1A8K7I4 AC006538.3-201ENST00000612495 578 ntBASIC15.82■□□□□ 0.12
CLCA1A8K7I4 BX640515.1-201ENST00000617215 977 ntBASIC15.82■□□□□ 0.12
CLCA1A8K7I4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 AL356309.3-201ENST00000624132 1934 ntBASIC15.82■□□□□ 0.12
CLCA1A8K7I4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCA1A8K7I4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms