Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 AC093909.1-201ENST00000504731 1122 ntBASIC12.67□□□□□ -0.38
KNCNA6PVL3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 AC124947.2-201ENST00000547118 1133 ntBASIC12.67□□□□□ -0.38
KNCNA6PVL3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 AP001005.1-201ENST00000571755 1248 ntBASIC12.67□□□□□ -0.38
KNCNA6PVL3 SLC25A6P4-201ENST00000586535 553 ntBASIC12.67□□□□□ -0.38
KNCNA6PVL3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 MIR7706-201ENST00000613747 67 ntBASIC12.67□□□□□ -0.38
KNCNA6PVL3 AC005593.1-201ENST00000624894 515 ntBASIC12.67□□□□□ -0.38
KNCNA6PVL3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.67□□□□□ -0.38
KNCNA6PVL3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KNCNA6PVL3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 AC073621.1-201ENST00000392730 636 ntBASIC12.66□□□□□ -0.38
KNCNA6PVL3 KRT18P27-201ENST00000427733 1299 ntBASIC12.66□□□□□ -0.38
KNCNA6PVL3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 AL662844.1-201ENST00000546340 181 ntBASIC12.66□□□□□ -0.38
KNCNA6PVL3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 TERC-201ENST00000602385 541 ntBASIC12.66□□□□□ -0.38
KNCNA6PVL3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
KNCNA6PVL3 AL805961.1-202ENST00000641562 540 ntBASIC12.66□□□□□ -0.38
KNCNA6PVL3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KNCNA6PVL3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms