Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AC007967.3-201ENST00000434308 558 ntBASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MEIS3P1A6NDR6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.52□□□□□ -0.08
MEIS3P1A6NDR6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 SPDYE15P-201ENST00000424157 909 ntBASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 HLA-F-220ENST00000434407 884 ntBASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 ZNF444P1-201ENST00000559497 298 ntBASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 AC067930.6-201ENST00000623257 4947 ntBASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 AL135999.2-201ENST00000622438 1686 ntBASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MEIS3P1A6NDR6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 GPR89P-201ENST00000407924 1495 ntBASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 AC097374.2-201ENST00000618617 1306 ntBASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 AC092597.1-201ENST00000487352 616 ntBASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 GPR32P1-201ENST00000601788 811 ntBASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MEIS3P1A6NDR6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms