Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC140113.2-201ENST00000604370 208 ntBASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 FAM197Y3-203ENST00000618346 717 ntBASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 UBALD1-205ENST00000590891 2641 ntBASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 KRT18P3-201ENST00000451602 1288 ntBASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC136632.2-201ENST00000512891 861 ntBASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 RNA5SP416-201ENST00000516838 111 ntBASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC034105.1-201ENST00000563488 319 ntBASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC132938.5-201ENST00000624980 1813 ntBASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC092053.1-201ENST00000605787 1936 ntBASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 AC011270.2-201ENST00000624293 2550 ntBASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 MIR1233-2-201ENST00000408138 82 ntBASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 MIR1233-1-201ENST00000408722 82 ntBASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.6□□□□□ -0.23
TCRBV4S1A1TA0A5B7 NCF1C-201ENST00000438382 1427 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms