Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 LINC02012-201ENST00000608206 1725 ntBASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 KRT8P23-201ENST00000560090 1207 ntBASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 CYP2A7P1-201ENST00000595391 815 ntBASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3DA0A087WVF3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 AC067863.1-201ENST00000494933 530 ntBASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 LINC01225-203ENST00000563550 1244 ntBASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 MIR3909-201ENST00000579518 119 ntBASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TBC1D3DA0A087WVF3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 FAM8A3P-201ENST00000427218 844 ntBASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 CNN2P2-201ENST00000443536 909 ntBASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 CNN2P3-201ENST00000450201 906 ntBASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 MIR3197-201ENST00000582241 73 ntBASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 AL136317.3-201ENST00000618497 906 ntBASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3DA0A087WVF3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms