Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 TOP3BP1-201ENST00000420768 1380 ntBASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.51■□□□□ 0.23
CSNK1G3Q9Y6M4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 MIR3909-201ENST00000579518 119 ntBASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 AP001059.3-201ENST00000619053 235 ntBASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.5■□□□□ 0.23
CSNK1G3Q9Y6M4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 AC106820.2-201ENST00000563775 3264 ntBASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 KRT18P32-201ENST00000424695 1287 ntBASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 CNN2P2-201ENST00000443536 909 ntBASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 CNN2P3-201ENST00000450201 906 ntBASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 AL136317.3-201ENST00000618497 906 ntBASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 AC084121.4-201ENST00000641598 221 ntBASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 AF228730.8-201ENST00000642140 221 ntBASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
CSNK1G3Q9Y6M4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms