Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB1Q9Y5F3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.89■□□□□ 0.3
PCDHB1Q9Y5F3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.89■□□□□ 0.3
PCDHB1Q9Y5F3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
PCDHB1Q9Y5F3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHB1Q9Y5F3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PCDHB1Q9Y5F3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHB1Q9Y5F3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHB1Q9Y5F3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHB1Q9Y5F3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.3
PCDHB1Q9Y5F3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 AC108073.2-201ENST00000464002 357 ntBASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 AL078644.1-201ENST00000609881 752 ntBASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 AL513190.1-201ENST00000621254 727 ntBASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB1Q9Y5F3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 NKILA-202ENST00000614771 2598 ntBASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 AC106886.4-201ENST00000623557 2502 ntBASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 AC254562.1-201ENST00000417586 456 ntBASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 DUX4L17-201ENST00000557360 1267 ntBASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 MIR3197-201ENST00000582241 73 ntBASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB1Q9Y5F3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHB1Q9Y5F3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms