Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00588Q9Y4M8 TUBB8P7-204ENST00000567960 1332 ntBASIC11.55□□□□□ -0.56
LINC00588Q9Y4M8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00588Q9Y4M8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00588Q9Y4M8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC00588Q9Y4M8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00588Q9Y4M8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00588Q9Y4M8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00588Q9Y4M8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00588Q9Y4M8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC00588Q9Y4M8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 TFAMP1-201ENST00000412727 736 ntBASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 RARRES2P8-201ENST00000566335 367 ntBASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 AC027612.4-201ENST00000605371 583 ntBASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 AL031055.1-201ENST00000606362 631 ntBASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 AR-207ENST00000612010 3896 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC00588Q9Y4M8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 AC139713.2-201ENST00000641328 2723 ntBASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 AC108860.2-201ENST00000562760 2183 ntBASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 RNU1-129P-201ENST00000384064 167 ntBASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 RN7SL589P-201ENST00000481268 310 ntBASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 KRT8P48-201ENST00000515599 1220 ntBASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 AC109635.5-201ENST00000533593 962 ntBASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 AL135744.1-201ENST00000565098 629 ntBASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC00588Q9Y4M8 U1.21-201ENST00000580816 167 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms