Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LEMD3Q9Y2U8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LEMD3Q9Y2U8 AC092053.1-201ENST00000605787 1936 ntBASIC20.35■□□□□ 0.85
LEMD3Q9Y2U8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LEMD3Q9Y2U8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.35■□□□□ 0.85
LEMD3Q9Y2U8 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.35■□□□□ 0.85
LEMD3Q9Y2U8 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 HLA-H-201ENST00000383620 1096 ntBASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 AC027369.6-201ENST00000525520 931 ntBASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 AL590560.3-201ENST00000623350 461 ntBASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LEMD3Q9Y2U8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.33■□□□□ 0.85
LEMD3Q9Y2U8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LEMD3Q9Y2U8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.33■□□□□ 0.84
LEMD3Q9Y2U8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LEMD3Q9Y2U8 AC100757.3-201ENST00000622361 1406 ntBASIC20.33■□□□□ 0.84
LEMD3Q9Y2U8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LEMD3Q9Y2U8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.33■□□□□ 0.84
LEMD3Q9Y2U8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.33■□□□□ 0.84
LEMD3Q9Y2U8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LEMD3Q9Y2U8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.33■□□□□ 0.84
LEMD3Q9Y2U8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LEMD3Q9Y2U8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.84
LEMD3Q9Y2U8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.33■□□□□ 0.84
LEMD3Q9Y2U8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LEMD3Q9Y2U8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 FAM220BP-201ENST00000377689 816 ntBASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 TSSK5P-201ENST00000423978 907 ntBASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 SPTSSB-204ENST00000617024 1292 ntBASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 KRT8P39-201ENST00000396270 1433 ntBASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 AL671710.1-201ENST00000610245 2349 ntBASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.32■□□□□ 0.84
LEMD3Q9Y2U8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 AC073439.1-201ENST00000624121 1774 ntBASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.31■□□□□ 0.84
LEMD3Q9Y2U8 AC067852.2-201ENST00000590513 2313 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms