Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 AC018845.2-201ENST00000568326 409 ntBASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 AC006504.4-201ENST00000592118 1568 ntBASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC3AQ9Y2H6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 CRYGEP-201ENST00000412192 528 ntBASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 AC108073.2-201ENST00000464002 357 ntBASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 MIR4751-201ENST00000578027 74 ntBASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 AC004706.3-202ENST00000621574 984 ntBASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
FNDC3AQ9Y2H6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 HTR5BP-201ENST00000430851 1154 ntBASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 AC093525.9-201ENST00000624961 1746 ntBASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FNDC3AQ9Y2H6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms