Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERGIC3Q9Y282 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.48■□□□□ 0.07
ERGIC3Q9Y282 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERGIC3Q9Y282 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ERGIC3Q9Y282 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERGIC3Q9Y282 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 EGFEM1P-202ENST00000431685 1563 ntBASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 IGHV3-52-201ENST00000519770 353 ntBASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERGIC3Q9Y282 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 HLA-A-202ENST00000376806 1854 ntBASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 CICP4-201ENST00000447359 2812 ntBASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 AC096633.1-201ENST00000422446 749 ntBASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 AC012618.2-201ENST00000428058 849 ntBASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 AP003071.4-201ENST00000562276 1284 ntBASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 TMEM191A-211ENST00000637163 1067 ntBASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 AL049637.2-201ENST00000641778 930 ntBASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERGIC3Q9Y282 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ERGIC3Q9Y282 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.46■□□□□ 0.06
ERGIC3Q9Y282 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ERGIC3Q9Y282 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.46■□□□□ 0.06
ERGIC3Q9Y282 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
ERGIC3Q9Y282 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ERGIC3Q9Y282 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.46■□□□□ 0.06
ERGIC3Q9Y282 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
ERGIC3Q9Y282 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERGIC3Q9Y282 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms