Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 SNX29P1-201ENST00000548357 1007 ntBASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 AL133215.2-201ENST00000609242 977 ntBASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 MIR6869-201ENST00000619434 62 ntBASIC20.26■□□□□ 0.83
ZC3H4Q9UPT8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 BANF1P1-201ENST00000553684 263 ntBASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 AC015936.2-201ENST00000593177 259 ntBASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 WIZP1-201ENST00000531444 2299 ntBASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.25■□□□□ 0.83
ZC3H4Q9UPT8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 AC020907.1-201ENST00000616460 1350 ntBASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 TMEM14DP-201ENST00000422205 345 ntBASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 AC105021.1-202ENST00000570572 669 ntBASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 TMEM261P1-201ENST00000604899 340 ntBASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 AL109936.8-201ENST00000641772 604 ntBASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZC3H4Q9UPT8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 PRYP6-201ENST00000514804 343 ntBASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 AC104989.1-201ENST00000519711 778 ntBASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 KRT18P55-202ENST00000578578 1546 ntBASIC20.23■□□□□ 0.83
ZC3H4Q9UPT8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.22■□□□□ 0.83
ZC3H4Q9UPT8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms