Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.53■□□□□ 0.4
AP4E1Q9UPM8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.53■□□□□ 0.4
AP4E1Q9UPM8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.53■□□□□ 0.4
AP4E1Q9UPM8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP4E1Q9UPM8 PCDHA14-201ENST00000506751 2298 ntBASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 AC129492.6-201ENST00000611383 1305 ntBASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 MPDU1-223ENST00000582151 728 ntBASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP4E1Q9UPM8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
AP4E1Q9UPM8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
AP4E1Q9UPM8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
AP4E1Q9UPM8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP4E1Q9UPM8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.52■□□□□ 0.39
AP4E1Q9UPM8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
AP4E1Q9UPM8 HLA-A-202ENST00000376806 1854 ntBASIC17.52■□□□□ 0.39
AP4E1Q9UPM8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.52■□□□□ 0.39
AP4E1Q9UPM8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.52■□□□□ 0.39
AP4E1Q9UPM8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.52■□□□□ 0.39
AP4E1Q9UPM8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 IGHV3-22-201ENST00000520721 359 ntBASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 UNC93B6-202ENST00000528242 690 ntBASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 OR7E47P-204ENST00000575924 449 ntBASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 MIR4751-201ENST00000578027 74 ntBASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 AC091167.2-201ENST00000579581 588 ntBASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 UBALD1-205ENST00000590891 2641 ntBASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
AP4E1Q9UPM8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4E1Q9UPM8 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.5■□□□□ 0.39
AP4E1Q9UPM8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP4E1Q9UPM8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP4E1Q9UPM8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.5■□□□□ 0.39
AP4E1Q9UPM8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
AP4E1Q9UPM8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
AP4E1Q9UPM8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP4E1Q9UPM8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms