Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 TSPY16P-201ENST00000449843 468 ntBASIC16.94■□□□□ 0.3
MBD1Q9UIS9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 AC026150.2-201ENST00000564693 1156 ntBASIC16.94■□□□□ 0.3
MBD1Q9UIS9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 AL009183.1-201ENST00000603760 355 ntBASIC16.94■□□□□ 0.3
MBD1Q9UIS9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
MBD1Q9UIS9 AC008677.1-201ENST00000519230 1561 ntBASIC16.94■□□□□ 0.3
MBD1Q9UIS9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 AC092068.3-201ENST00000587894 2016 ntBASIC16.93■□□□□ 0.3
MBD1Q9UIS9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 UXT-AS1-201ENST00000590504 1525 ntBASIC16.93■□□□□ 0.3
MBD1Q9UIS9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 AC107890.1-201ENST00000422478 521 ntBASIC16.93■□□□□ 0.3
MBD1Q9UIS9 SPDYE14P-201ENST00000442619 822 ntBASIC16.93■□□□□ 0.3
MBD1Q9UIS9 AC125807.1-201ENST00000483097 614 ntBASIC16.93■□□□□ 0.3
MBD1Q9UIS9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MBD1Q9UIS9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 TREML5P-201ENST00000421694 576 ntBASIC16.92■□□□□ 0.3
MBD1Q9UIS9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 HLA-J-202ENST00000469281 1241 ntBASIC16.92■□□□□ 0.3
MBD1Q9UIS9 IGHV3-62-201ENST00000520057 340 ntBASIC16.92■□□□□ 0.3
MBD1Q9UIS9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 AC005412.3-201ENST00000580309 715 ntBASIC16.92■□□□□ 0.3
MBD1Q9UIS9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MBD1Q9UIS9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MBD1Q9UIS9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms