Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP25Q9UHP3 AP000550.4-202ENST00000639755 178 ntBASIC19.42■□□□□ 0.7
USP25Q9UHP3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP25Q9UHP3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP25Q9UHP3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP25Q9UHP3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP25Q9UHP3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 FER1L4-210ENST00000615531 5998 ntBASIC19.42■□□□□ 0.7
USP25Q9UHP3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
USP25Q9UHP3 GPR89P-201ENST00000407924 1495 ntBASIC19.41■□□□□ 0.7
USP25Q9UHP3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 AC096582.2-201ENST00000510860 516 ntBASIC19.41■□□□□ 0.7
USP25Q9UHP3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 AC114341.1-201ENST00000618070 349 ntBASIC19.41■□□□□ 0.7
USP25Q9UHP3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP25Q9UHP3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.41■□□□□ 0.7
USP25Q9UHP3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 RCN1P2-201ENST00000398357 915 ntBASIC19.4■□□□□ 0.7
USP25Q9UHP3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 LINC00265-3P-201ENST00000447588 903 ntBASIC19.4■□□□□ 0.7
USP25Q9UHP3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 AC092329.2-201ENST00000598402 547 ntBASIC19.4■□□□□ 0.7
USP25Q9UHP3 AP000867.4-201ENST00000641616 219 ntBASIC19.4■□□□□ 0.7
USP25Q9UHP3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
USP25Q9UHP3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP25Q9UHP3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.39■□□□□ 0.7
USP25Q9UHP3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
USP25Q9UHP3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
USP25Q9UHP3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
USP25Q9UHP3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
USP25Q9UHP3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP25Q9UHP3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP25Q9UHP3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.39■□□□□ 0.7
USP25Q9UHP3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP25Q9UHP3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP25Q9UHP3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.39■□□□□ 0.69
USP25Q9UHP3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
USP25Q9UHP3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
USP25Q9UHP3 SIGLEC30P-201ENST00000455569 941 ntBASIC19.39■□□□□ 0.69
USP25Q9UHP3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.39■□□□□ 0.69
USP25Q9UHP3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.39■□□□□ 0.69
USP25Q9UHP3 MIR3180-1-201ENST00000580374 94 ntBASIC19.39■□□□□ 0.69
USP25Q9UHP3 MIR3180-3-201ENST00000584616 94 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms