Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 ATP5G2P1-201ENST00000433580 426 ntBASIC14.94□□□□□ -0.02
DUX4Q9UBX2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.94□□□□□ -0.02
DUX4Q9UBX2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 AL138688.1-201ENST00000624851 1594 ntBASIC14.94□□□□□ -0.02
DUX4Q9UBX2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
DUX4Q9UBX2 AC022188.1-201ENST00000620960 1664 ntBASIC14.93□□□□□ -0.02
DUX4Q9UBX2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 HCG4P8-203ENST00000443049 980 ntBASIC14.93□□□□□ -0.02
DUX4Q9UBX2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.93□□□□□ -0.02
DUX4Q9UBX2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.93□□□□□ -0.02
DUX4Q9UBX2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 AP000867.3-201ENST00000524675 377 ntBASIC14.92□□□□□ -0.02
DUX4Q9UBX2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 AC005336.2-201ENST00000593183 939 ntBASIC14.92□□□□□ -0.02
DUX4Q9UBX2 AC092329.2-201ENST00000598402 547 ntBASIC14.92□□□□□ -0.02
DUX4Q9UBX2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.92□□□□□ -0.02
DUX4Q9UBX2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms