Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PPARGC1AQ9UBK2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 AC009947.1-201ENST00000444350 727 ntBASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PPARGC1AQ9UBK2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 PRSS29P-201ENST00000440800 595 ntBASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 AC108073.2-201ENST00000464002 357 ntBASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 RPL13AP23-201ENST00000480739 586 ntBASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 AC108751.1-201ENST00000490852 363 ntBASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 Z83851.2-201ENST00000609564 659 ntBASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PPARGC1AQ9UBK2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms