Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 FOXO1B-201ENST00000504678 1527 ntBASIC18.97■□□□□ 0.63
COL20A1Q9P218 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL20A1Q9P218 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL20A1Q9P218 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL20A1Q9P218 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL20A1Q9P218 AC142381.1-201ENST00000426099 345 ntBASIC18.97■□□□□ 0.63
COL20A1Q9P218 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 AC051619.7-201ENST00000568314 623 ntBASIC18.97■□□□□ 0.63
COL20A1Q9P218 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL20A1Q9P218 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL20A1Q9P218 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL20A1Q9P218 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL20A1Q9P218 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
COL20A1Q9P218 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 FAM86GP-201ENST00000448322 971 ntBASIC18.96■□□□□ 0.63
COL20A1Q9P218 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.96■□□□□ 0.63
COL20A1Q9P218 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL20A1Q9P218 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL20A1Q9P218 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL20A1Q9P218 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL20A1Q9P218 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL20A1Q9P218 AL391256.1-201ENST00000443260 1855 ntBASIC18.95■□□□□ 0.62
COL20A1Q9P218 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL20A1Q9P218 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL20A1Q9P218 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL20A1Q9P218 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL20A1Q9P218 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL20A1Q9P218 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL20A1Q9P218 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL20A1Q9P218 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
COL20A1Q9P218 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COL20A1Q9P218 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
COL20A1Q9P218 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms