Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 UBE2SP1-201ENST00000450587 669 ntBASIC16.41■□□□□ 0.22
NDE1Q9NXR1 AC068472.1-201ENST00000474589 881 ntBASIC16.41■□□□□ 0.22
NDE1Q9NXR1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 AL136038.4-201ENST00000603606 1261 ntBASIC16.41■□□□□ 0.22
NDE1Q9NXR1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 AC010460.3-201ENST00000511359 1579 ntBASIC16.41■□□□□ 0.22
NDE1Q9NXR1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDE1Q9NXR1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDE1Q9NXR1 AL391807.1-203ENST00000604392 2365 ntBASIC16.4■□□□□ 0.22
NDE1Q9NXR1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
NDE1Q9NXR1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NDE1Q9NXR1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 ALOX12P2-203ENST00000570921 1945 ntBASIC16.39■□□□□ 0.21
NDE1Q9NXR1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 AL645728.1-201ENST00000366221 2101 ntBASIC16.39■□□□□ 0.21
NDE1Q9NXR1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 MIR1238-201ENST00000408483 83 ntBASIC16.39■□□□□ 0.21
NDE1Q9NXR1 HMGA1P5-201ENST00000412453 271 ntBASIC16.39■□□□□ 0.21
NDE1Q9NXR1 AL390955.1-201ENST00000428694 934 ntBASIC16.39■□□□□ 0.21
NDE1Q9NXR1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NDE1Q9NXR1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms