Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.264e-6■□□□□ 8.2
DROSHAQ9NRR4 PCED1A-204ENST00000448755 1170 ntTSL 328.94■■■□□ 2.224e-6■□□□□ 8.2
DROSHAQ9NRR4 TAF15-209ENST00000604434 2103 nt28.81■■■□□ 2.24e-6■□□□□ 8.2
DROSHAQ9NRR4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.193e-8■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC28.62■■■□□ 2.172e-11■□□□□ 8.2
DROSHAQ9NRR4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC28.52■■■□□ 2.162e-9■□□□□ 8.2
DROSHAQ9NRR4 PILRB-206ENST00000443526 1364 ntTSL 1 (best)28.5■■■□□ 2.154e-6■□□□□ 8.2
DROSHAQ9NRR4 ABHD5-201ENST00000013894 833 ntTSL 328.37■■■□□ 2.134e-6■□□□□ 8.2
DROSHAQ9NRR4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC28.35■■■□□ 2.134e-6■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-212ENST00000589791 1329 ntTSL 228.27■■■□□ 2.123e-8■□□□□ 8.2
DROSHAQ9NRR4 PIEZO1-206ENST00000474606 544 ntTSL 428.1■■■□□ 2.094e-6■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-208ENST00000590925 648 ntTSL 1 (best)28.09■■■□□ 2.092e-11■□□□□ 8.2
DROSHAQ9NRR4 PILRB-202ENST00000422808 1599 ntTSL 1 (best)27.98■■■□□ 2.074e-6■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.052e-10■□□□□ 8.2
DROSHAQ9NRR4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC27.76■■■□□ 2.044e-6■□□□□ 8.2
DROSHAQ9NRR4 STX4-208ENST00000478150 545 ntTSL 427.45■■□□□ 1.983e-8■□□□□ 8.2
DROSHAQ9NRR4 RPL27-208ENST00000593262 1872 ntTSL 227.4■■□□□ 1.982e-10■□□□□ 8.2
DROSHAQ9NRR4 PIEZO1-215ENST00000566414 564 ntTSL 427.34■■□□□ 1.974e-6■□□□□ 8.2
DROSHAQ9NRR4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.962e-10■□□□□ 8.2
DROSHAQ9NRR4 STRN4-222ENST00000601869 2240 nt27.29■■□□□ 1.964e-6■□□□□ 8.2
DROSHAQ9NRR4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC27.08■■□□□ 1.932e-9■□□□□ 8.2
DROSHAQ9NRR4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.913e-7■□□□□ 8.2
DROSHAQ9NRR4 PILRB-201ENST00000419749 1506 ntTSL 1 (best)27.01■■□□□ 1.914e-6■□□□□ 8.2
DROSHAQ9NRR4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC26.95■■□□□ 1.94e-6■□□□□ 8.2
DROSHAQ9NRR4 PSMD2-215ENST00000487475 910 ntTSL 226.86■■□□□ 1.892e-9■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-218ENST00000550856 1003 ntTSL 226.71■■□□□ 1.872e-10■□□□□ 8.2
DROSHAQ9NRR4 PSMD2-219ENST00000492191 581 ntTSL 226.36■■□□□ 1.812e-9■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-208ENST00000588450 2858 ntTSL 226.24■■□□□ 1.793e-8■□□□□ 8.2
DROSHAQ9NRR4 TAF15-203ENST00000603393 1214 ntTSL 1 (best)26.21■■□□□ 1.794e-6■□□□□ 8.2
DROSHAQ9NRR4 TAF15-204ENST00000603427 547 ntTSL 426.21■■□□□ 1.794e-6■□□□□ 8.2
DROSHAQ9NRR4 TAF15-208ENST00000604360 409 ntTSL 326.21■■□□□ 1.794e-6■□□□□ 8.2
DROSHAQ9NRR4 TAF15-214ENST00000605649 776 ntTSL 526.21■■□□□ 1.794e-6■□□□□ 8.2
DROSHAQ9NRR4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.763e-7■□□□□ 8.2
DROSHAQ9NRR4 CAPZA2-202ENST00000414148 360 ntTSL 526■■□□□ 1.753e-8■□□□□ 8.2
DROSHAQ9NRR4 PILRB-210ENST00000457519 2074 ntTSL 1 (best)25.83■■□□□ 1.734e-6■□□□□ 8.2
DROSHAQ9NRR4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC25.79■■□□□ 1.724e-6■□□□□ 8.2
DROSHAQ9NRR4 RPL23A-208ENST00000580755 412 ntTSL 225.74■■□□□ 1.714e-6■□□□□ 8.2
DROSHAQ9NRR4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.73e-8■□□□□ 8.2
DROSHAQ9NRR4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC25.25■■□□□ 1.634e-6■□□□□ 8.2
DROSHAQ9NRR4 TCF3-215ENST00000590684 1313 ntTSL 325.04■■□□□ 1.64e-6■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.63e-8■□□□□ 8.2
DROSHAQ9NRR4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.583e-8■□□□□ 8.2
DROSHAQ9NRR4 PCED1A-203ENST00000439542 1187 ntTSL 224.81■■□□□ 1.564e-6■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC24.59■■□□□ 1.531e-15■□□□□ 8.2
DROSHAQ9NRR4 TCF3-214ENST00000590605 541 ntTSL 224.13■■□□□ 1.454e-6■□□□□ 8.2
DROSHAQ9NRR4 NFE2-205ENST00000553198 1208 ntTSL 524.11■■□□□ 1.453e-8■□□□□ 8.2
DROSHAQ9NRR4 TCF3-217ENST00000592628 1751 ntTSL 523.73■■□□□ 1.394e-6■□□□□ 8.2
DROSHAQ9NRR4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.373e-8■□□□□ 8.2
DROSHAQ9NRR4 LINC01029-203ENST00000582805 788 ntTSL 1 (best)23.02■■□□□ 1.282e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-226ENST00000552461 2591 ntTSL 222.88■■□□□ 1.252e-10■□□□□ 8.2
DROSHAQ9NRR4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.154e-6■□□□□ 8.2
DROSHAQ9NRR4 UBE2I-209ENST00000562470 433 ntTSL 222.14■■□□□ 1.143e-7■□□□□ 8.2
DROSHAQ9NRR4 PILRB-209ENST00000455145 902 ntTSL 522.1■■□□□ 1.134e-6■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-206ENST00000546990 770 ntTSL 321.89■■□□□ 1.12e-10■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC21.86■■□□□ 1.092e-11■□□□□ 8.2
DROSHAQ9NRR4 TCF3-218ENST00000593064 2694 ntTSL 221.85■■□□□ 1.094e-6■□□□□ 8.2
DROSHAQ9NRR4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC21.68■■□□□ 1.062e-10■□□□□ 8.2
DROSHAQ9NRR4 FBXL18-202ENST00000415009 2526 ntTSL 221.66■■□□□ 1.064e-6■□□□□ 8.2
DROSHAQ9NRR4 PILRB-203ENST00000431140 772 ntTSL 321.48■■□□□ 1.034e-6■□□□□ 8.2
DROSHAQ9NRR4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.973e-8■□□□□ 8.2
DROSHAQ9NRR4 ABHD5-204ENST00000456453 876 ntTSL 421.09■□□□□ 0.974e-6■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-205ENST00000587746 492 ntTSL 1 (best)21.07■□□□□ 0.962e-11■□□□□ 8.2
DROSHAQ9NRR4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.952e-9■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-204ENST00000586192 524 ntTSL 1 (best)20.96■□□□□ 0.952e-11■□□□□ 8.2
DROSHAQ9NRR4 TCF3-209ENST00000586410 288 ntTSL 520.77■□□□□ 0.924e-6■□□□□ 8.2
DROSHAQ9NRR4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.892e-12■□□□□ 8.2
DROSHAQ9NRR4 TAF15-212ENST00000604879 808 ntTSL 520.25■□□□□ 0.834e-6■□□□□ 8.2
DROSHAQ9NRR4 TAF15-213ENST00000605197 760 ntTSL 220.25■□□□□ 0.834e-6■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC19.96■□□□□ 0.792e-11■□□□□ 8.2
DROSHAQ9NRR4 ZNHIT1-203ENST00000485387 2898 ntTSL 1 (best)19.9■□□□□ 0.783e-7■□□□□ 8.2
DROSHAQ9NRR4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.722e-9■□□□□ 8.2
DROSHAQ9NRR4 CBL-205ENST00000637974 3030 ntAPPRIS ALT2 TSL 519.44■□□□□ 0.74e-6■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-204ENST00000546564 844 ntTSL 219.42■□□□□ 0.72e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-216ENST00000550296 562 ntTSL 219.42■□□□□ 0.72e-10■□□□□ 8.2
DROSHAQ9NRR4 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.684e-6■□□□□ 8.2
DROSHAQ9NRR4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC19.21■□□□□ 0.673e-7■□□□□ 8.2
DROSHAQ9NRR4 ATP11A-206ENST00000419631 2446 ntTSL 319.15■□□□□ 0.661e-16■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-205ENST00000546989 993 ntTSL 5 BASIC18.87■□□□□ 0.612e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-209ENST00000547211 781 ntTSL 318.87■□□□□ 0.612e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-215ENST00000549242 518 ntTSL 218.87■□□□□ 0.612e-10■□□□□ 8.2
DROSHAQ9NRR4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.83■□□□□ 0.64e-6■□□□□ 8.2
DROSHAQ9NRR4 TMC6-215ENST00000590494 702 ntTSL 218.51■□□□□ 0.554e-6■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.542e-11■□□□□ 8.2
DROSHAQ9NRR4 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.544e-6■□□□□ 8.2
DROSHAQ9NRR4 FBXL18-204ENST00000458142 2686 ntTSL 218.11■□□□□ 0.494e-6■□□□□ 8.2
DROSHAQ9NRR4 PILRB-211ENST00000493091 4345 ntTSL 217.99■□□□□ 0.474e-6■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-209ENST00000591800 496 ntTSL 1 (best)17.98■□□□□ 0.472e-11■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC17.91■□□□□ 0.462e-11■□□□□ 8.2
DROSHAQ9NRR4 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.434e-6■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-203ENST00000392514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.382e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-217ENST00000550423 561 ntTSL 317.45■□□□□ 0.382e-10■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-214ENST00000549098 1106 ntTSL 217.16■□□□□ 0.342e-10■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-212ENST00000583307 886 ntTSL 216.8■□□□□ 0.281e-15■□□□□ 8.2
DROSHAQ9NRR4 HIST1H2BC-202ENST00000396984 571 ntAPPRIS P1 BASIC16.5■□□□□ 0.234e-6■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-202ENST00000313104 912 ntTSL 1 (best) BASIC16.46■□□□□ 0.232e-10■□□□□ 8.2
DROSHAQ9NRR4 CBL-203ENST00000634586 3457 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.24e-6■□□□□ 8.2
DROSHAQ9NRR4 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.173e-8■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-224ENST00000551914 402 ntTSL 316.11■□□□□ 0.172e-10■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-204ENST00000577513 731 ntTSL 315.85■□□□□ 0.131e-15■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-212ENST00000548551 543 ntTSL 215.8■□□□□ 0.122e-10■□□□□ 8.2
Retrieved 100 of 16,331 protein–RNA pairs in 424.1 ms