Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 AL096865.1-201ENST00000606796 927 ntBASIC17.47■□□□□ 0.39
HPS4Q9NQG7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
HPS4Q9NQG7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 AL592309.1-201ENST00000443127 649 ntBASIC17.46■□□□□ 0.39
HPS4Q9NQG7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 AL135744.1-201ENST00000565098 629 ntBASIC17.46■□□□□ 0.39
HPS4Q9NQG7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HPS4Q9NQG7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HPS4Q9NQG7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
HPS4Q9NQG7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
HPS4Q9NQG7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HPS4Q9NQG7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.45■□□□□ 0.38
HPS4Q9NQG7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 FAM58DP-201ENST00000428076 619 ntBASIC17.45■□□□□ 0.38
HPS4Q9NQG7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 FAM86GP-201ENST00000448322 971 ntBASIC17.45■□□□□ 0.38
HPS4Q9NQG7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 DUX4L17-201ENST00000557360 1267 ntBASIC17.45■□□□□ 0.38
HPS4Q9NQG7 RARRES2P8-201ENST00000566335 367 ntBASIC17.45■□□□□ 0.38
HPS4Q9NQG7 AC015911.4-201ENST00000588022 1070 ntBASIC17.45■□□□□ 0.38
HPS4Q9NQG7 Z92544.3-201ENST00000624747 417 ntBASIC17.45■□□□□ 0.38
HPS4Q9NQG7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 AC133963.1-201ENST00000504166 1679 ntBASIC17.45■□□□□ 0.38
HPS4Q9NQG7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS4Q9NQG7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS4Q9NQG7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms