Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 EMBP1-201ENST00000458200 901 ntBASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 HLA-J-202ENST00000469281 1241 ntBASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 AL160237.2-201ENST00000556165 472 ntBASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 MTDHP3-201ENST00000594186 672 ntBASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NEUROD4Q9HD90 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 HLA-A-202ENST00000376806 1854 ntBASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 TSPY19P-201ENST00000418461 509 ntBASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 TSPY18P-201ENST00000441642 509 ntBASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 SCARNA2-201ENST00000458748 420 ntBASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 AC009078.2-202ENST00000463353 338 ntBASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 AL031008.1-201ENST00000619963 541 ntBASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.97■□□□□ 0.15
NEUROD4Q9HD90 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 AC139887.3-201ENST00000568585 713 ntBASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.96■□□□□ 0.15
NEUROD4Q9HD90 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms