Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX8Q9HC52 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX8Q9HC52 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CBX8Q9HC52 MST1L-201ENST00000442552 2185 ntBASIC18.89■□□□□ 0.61
CBX8Q9HC52 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.89■□□□□ 0.61
CBX8Q9HC52 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CBX8Q9HC52 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.89■□□□□ 0.61
CBX8Q9HC52 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CBX8Q9HC52 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.89■□□□□ 0.61
CBX8Q9HC52 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.89■□□□□ 0.61
CBX8Q9HC52 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 AP002414.1-201ENST00000391405 1147 ntBASIC18.88■□□□□ 0.61
CBX8Q9HC52 AL137013.1-201ENST00000432946 1228 ntBASIC18.88■□□□□ 0.61
CBX8Q9HC52 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 AL021920.2-201ENST00000624828 1351 ntBASIC18.88■□□□□ 0.61
CBX8Q9HC52 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 AC148477.5-201ENST00000625164 1645 ntBASIC18.88■□□□□ 0.61
CBX8Q9HC52 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX8Q9HC52 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX8Q9HC52 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.87■□□□□ 0.61
CBX8Q9HC52 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 ACTG1P4-201ENST00000425123 1122 ntBASIC18.87■□□□□ 0.61
CBX8Q9HC52 GGT3P-204ENST00000453783 1664 ntBASIC18.87■□□□□ 0.61
CBX8Q9HC52 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 AC011467.2-201ENST00000598425 242 ntBASIC18.87■□□□□ 0.61
CBX8Q9HC52 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 AC006277.1-201ENST00000624348 1610 ntBASIC18.87■□□□□ 0.61
CBX8Q9HC52 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CBX8Q9HC52 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX8Q9HC52 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.86■□□□□ 0.61
CBX8Q9HC52 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms