Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
LRRC40Q9H9A6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 AC087163.2-201ENST00000457299 853 ntBASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 OR7E14P-202ENST00000530490 1290 ntBASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 AC013467.2-201ENST00000605472 835 ntBASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC40Q9H9A6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 AC006277.1-201ENST00000624348 1610 ntBASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 HLA-J-202ENST00000469281 1241 ntBASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC40Q9H9A6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.34
LRRC40Q9H9A6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.34
LRRC40Q9H9A6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
LRRC40Q9H9A6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 KRT18P27-201ENST00000427733 1299 ntBASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 RPS2P1-201ENST00000434010 821 ntBASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 AL139011.1-202ENST00000642063 584 ntBASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC40Q9H9A6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms