Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 BX842568.4-201ENST00000421222 227 ntBASIC19.87■□□□□ 0.77
RNF41Q9H4P4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.87■□□□□ 0.77
RNF41Q9H4P4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
RNF41Q9H4P4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 YBX2P1-201ENST00000394192 760 ntBASIC19.86■□□□□ 0.77
RNF41Q9H4P4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 AC140658.5-201ENST00000438532 169 ntBASIC19.86■□□□□ 0.77
RNF41Q9H4P4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 MIR3909-201ENST00000579518 119 ntBASIC19.86■□□□□ 0.77
RNF41Q9H4P4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF41Q9H4P4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 AC020916.1-201ENST00000587762 1774 ntBASIC19.85■□□□□ 0.77
RNF41Q9H4P4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF41Q9H4P4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 RNU1-129P-201ENST00000384064 167 ntBASIC19.84■□□□□ 0.77
RNF41Q9H4P4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 U1.21-201ENST00000580816 167 ntBASIC19.84■□□□□ 0.77
RNF41Q9H4P4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.84■□□□□ 0.77
RNF41Q9H4P4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF41Q9H4P4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms