Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 HLA-DQB2-231ENST00000435145 2026 ntBASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 AC023824.1-201ENST00000562945 2975 ntBASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 AC126177.1-201ENST00000547829 2218 ntBASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 RNF152P1-201ENST00000397754 604 ntBASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 TSPY22P-201ENST00000427496 604 ntBASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 PAICSP2-201ENST00000429118 1150 ntBASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 ZNF736P1Y-201ENST00000440402 1276 ntBASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 NUS1P1-201ENST00000446295 882 ntBASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 HOMER2P1-201ENST00000455653 964 ntBASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 AC012306.2-201ENST00000609350 630 ntBASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 AC083849.1-201ENST00000615227 514 ntBASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 AC073592.5-201ENST00000624854 528 ntBASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 FES-204ENST00000414248 2327 ntTSL 2 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
KRTAP3-1Q9BYR8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 HNRNPRP1-201ENST00000453465 1695 ntBASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
KRTAP3-1Q9BYR8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms