Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LCE3DQ9BYE3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 AC006538.1-201ENST00000567905 1585 ntBASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 LINC00167-201ENST00000530583 1419 ntBASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 AC096733.2-201ENST00000609937 1394 ntBASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 SON-203ENST00000381679 7860 ntTSL 5 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
LCE3DQ9BYE3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms