Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VGLL1Q99990 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VGLL1Q99990 HLA-A-202ENST00000376806 1854 ntBASIC12.87□□□□□ -0.35
VGLL1Q99990 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VGLL1Q99990 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
VGLL1Q99990 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.87□□□□□ -0.35
VGLL1Q99990 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.86□□□□□ -0.35
VGLL1Q99990 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
VGLL1Q99990 AL645728.1-201ENST00000366221 2101 ntBASIC12.86□□□□□ -0.35
VGLL1Q99990 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
VGLL1Q99990 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.86□□□□□ -0.35
VGLL1Q99990 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
VGLL1Q99990 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.86□□□□□ -0.35
VGLL1Q99990 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VGLL1Q99990 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 AC003669.1-201ENST00000334569 611 ntBASIC12.86□□□□□ -0.35
VGLL1Q99990 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.86□□□□□ -0.35
VGLL1Q99990 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.86□□□□□ -0.35
VGLL1Q99990 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.86□□□□□ -0.35
VGLL1Q99990 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.86□□□□□ -0.35
VGLL1Q99990 AC091607.1-201ENST00000490318 1060 ntBASIC12.86□□□□□ -0.35
VGLL1Q99990 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
VGLL1Q99990 AC022616.7-201ENST00000525383 220 ntBASIC12.86□□□□□ -0.35
VGLL1Q99990 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
VGLL1Q99990 AC009533.2-201ENST00000543664 586 ntBASIC12.86□□□□□ -0.35
VGLL1Q99990 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
VGLL1Q99990 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.86□□□□□ -0.35
VGLL1Q99990 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.86□□□□□ -0.35
VGLL1Q99990 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
VGLL1Q99990 AC005052.1-201ENST00000625181 2492 ntBASIC12.86□□□□□ -0.35
VGLL1Q99990 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
VGLL1Q99990 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
VGLL1Q99990 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VGLL1Q99990 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.86□□□□□ -0.35
VGLL1Q99990 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
VGLL1Q99990 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.86□□□□□ -0.35
VGLL1Q99990 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
VGLL1Q99990 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
VGLL1Q99990 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.86□□□□□ -0.35
VGLL1Q99990 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VGLL1Q99990 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
VGLL1Q99990 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.85□□□□□ -0.35
VGLL1Q99990 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.85□□□□□ -0.35
VGLL1Q99990 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.85□□□□□ -0.35
VGLL1Q99990 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 AL391256.1-201ENST00000443260 1855 ntBASIC12.85□□□□□ -0.35
VGLL1Q99990 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 CYP2T1P-202ENST00000641596 2535 ntBASIC12.85□□□□□ -0.35
VGLL1Q99990 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
VGLL1Q99990 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.85□□□□□ -0.35
VGLL1Q99990 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.85□□□□□ -0.35
VGLL1Q99990 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VGLL1Q99990 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
VGLL1Q99990 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.85□□□□□ -0.35
VGLL1Q99990 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.85□□□□□ -0.35
VGLL1Q99990 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.85□□□□□ -0.35
VGLL1Q99990 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.85□□□□□ -0.35
VGLL1Q99990 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
VGLL1Q99990 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.85□□□□□ -0.35
VGLL1Q99990 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms