Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.25□□□□□ -0.61
LITAFQ99732 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.25□□□□□ -0.61
LITAFQ99732 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
LITAFQ99732 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LITAFQ99732 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LITAFQ99732 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LITAFQ99732 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC11.24□□□□□ -0.61
LITAFQ99732 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.24□□□□□ -0.61
LITAFQ99732 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.24□□□□□ -0.61
LITAFQ99732 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.24□□□□□ -0.61
LITAFQ99732 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.24□□□□□ -0.61
LITAFQ99732 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.24□□□□□ -0.61
LITAFQ99732 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.24□□□□□ -0.61
LITAFQ99732 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LITAFQ99732 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LITAFQ99732 UBE2SP1-201ENST00000450587 669 ntBASIC11.24□□□□□ -0.61
LITAFQ99732 GXYLT1P6-201ENST00000456472 1187 ntBASIC11.24□□□□□ -0.61
LITAFQ99732 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC11.24□□□□□ -0.61
LITAFQ99732 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 STK25P1-201ENST00000585406 838 ntBASIC11.24□□□□□ -0.61
LITAFQ99732 REXO1L10P-201ENST00000615707 1290 ntBASIC11.24□□□□□ -0.61
LITAFQ99732 REXO1L12P-201ENST00000622156 912 ntBASIC11.24□□□□□ -0.61
LITAFQ99732 AC073648.6-201ENST00000641589 218 ntBASIC11.24□□□□□ -0.61
LITAFQ99732 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC11.24□□□□□ -0.61
LITAFQ99732 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LITAFQ99732 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.24□□□□□ -0.61
LITAFQ99732 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
LITAFQ99732 AL109954.1-202ENST00000564051 2148 ntBASIC11.24□□□□□ -0.61
LITAFQ99732 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.24□□□□□ -0.61
LITAFQ99732 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LITAFQ99732 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.24□□□□□ -0.61
LITAFQ99732 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.23□□□□□ -0.61
LITAFQ99732 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LITAFQ99732 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 AC097637.2-201ENST00000624096 1997 ntBASIC11.23□□□□□ -0.61
LITAFQ99732 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LITAFQ99732 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LITAFQ99732 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.23□□□□□ -0.61
LITAFQ99732 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LITAFQ99732 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LITAFQ99732 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LITAFQ99732 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC11.23□□□□□ -0.61
LITAFQ99732 AC068472.1-201ENST00000474589 881 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms