Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCL13Q99616 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.16□□□□□ -0.14
CCL13Q99616 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 PCDHB17P-201ENST00000539533 2393 ntBASIC14.16□□□□□ -0.14
CCL13Q99616 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCL13Q99616 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCL13Q99616 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL13Q99616 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL13Q99616 AC129492.6-201ENST00000611383 1305 ntBASIC14.15□□□□□ -0.14
CCL13Q99616 KRT8P49-201ENST00000604166 1432 ntBASIC14.15□□□□□ -0.14
CCL13Q99616 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.15□□□□□ -0.14
CCL13Q99616 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL13Q99616 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.15□□□□□ -0.14
CCL13Q99616 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CCL13Q99616 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CCL13Q99616 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL13Q99616 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL13Q99616 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.15□□□□□ -0.14
CCL13Q99616 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.15□□□□□ -0.14
CCL13Q99616 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL13Q99616 REXO1L3P-201ENST00000622202 1288 ntBASIC14.15□□□□□ -0.14
CCL13Q99616 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 AC105020.1-201ENST00000435356 2205 ntBASIC14.15□□□□□ -0.14
CCL13Q99616 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL13Q99616 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CCL13Q99616 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
CCL13Q99616 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.15□□□□□ -0.14
CCL13Q99616 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCL13Q99616 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CCL13Q99616 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CCL13Q99616 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
CCL13Q99616 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
CCL13Q99616 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CCL13Q99616 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL13Q99616 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL13Q99616 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL13Q99616 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CCL13Q99616 TOP3BP1-201ENST00000420768 1380 ntBASIC14.14□□□□□ -0.15
CCL13Q99616 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CCL13Q99616 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL13Q99616 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL13Q99616 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.14□□□□□ -0.15
CCL13Q99616 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCL13Q99616 AP000347.1-202ENST00000435868 847 ntBASIC14.14□□□□□ -0.15
CCL13Q99616 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCL13Q99616 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.14□□□□□ -0.15
CCL13Q99616 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL13Q99616 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL13Q99616 AC107918.2-201ENST00000530817 355 ntBASIC14.14□□□□□ -0.15
CCL13Q99616 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.14□□□□□ -0.15
CCL13Q99616 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL13Q99616 AC064836.3-201ENST00000607928 673 ntBASIC14.14□□□□□ -0.15
CCL13Q99616 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 AD000864.1-201ENST00000624076 2295 ntBASIC14.14□□□□□ -0.15
CCL13Q99616 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.14□□□□□ -0.15
CCL13Q99616 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 AL121761.2-201ENST00000598007 1648 ntBASIC14.14□□□□□ -0.15
CCL13Q99616 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CCL13Q99616 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CCL13Q99616 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CCL13Q99616 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCL13Q99616 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms