Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV9Q99603 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV9Q99603 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV9Q99603 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRGV9Q99603 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV9Q99603 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
TRGV9Q99603 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRGV9Q99603 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV9Q99603 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV9Q99603 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV9Q99603 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRGV9Q99603 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV9Q99603 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.2□□□□□ -0.3
TRGV9Q99603 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV9Q99603 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.2□□□□□ -0.3
TRGV9Q99603 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV9Q99603 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
TRGV9Q99603 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.2□□□□□ -0.3
TRGV9Q99603 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV9Q99603 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.2□□□□□ -0.3
TRGV9Q99603 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV9Q99603 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV9Q99603 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV9Q99603 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV9Q99603 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.19□□□□□ -0.3
TRGV9Q99603 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV9Q99603 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRGV9Q99603 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV9Q99603 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV9Q99603 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV9Q99603 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV9Q99603 AP002383.4-201ENST00000442518 975 ntBASIC13.19□□□□□ -0.3
TRGV9Q99603 LINC00265-3P-201ENST00000447588 903 ntBASIC13.19□□□□□ -0.3
TRGV9Q99603 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.19□□□□□ -0.3
TRGV9Q99603 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV9Q99603 AC074051.2-201ENST00000565115 352 ntBASIC13.19□□□□□ -0.3
TRGV9Q99603 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
TRGV9Q99603 AC092329.2-201ENST00000598402 547 ntBASIC13.19□□□□□ -0.3
TRGV9Q99603 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRGV9Q99603 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRGV9Q99603 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 AC079776.2-201ENST00000641154 1609 ntBASIC13.19□□□□□ -0.3
TRGV9Q99603 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV9Q99603 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV9Q99603 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
TRGV9Q99603 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.19□□□□□ -0.3
TRGV9Q99603 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 AC243591.1-201ENST00000452967 1364 ntBASIC13.19□□□□□ -0.3
TRGV9Q99603 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV9Q99603 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV9Q99603 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV9Q99603 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRGV9Q99603 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRGV9Q99603 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV9Q99603 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.18□□□□□ -0.3
TRGV9Q99603 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.18□□□□□ -0.3
TRGV9Q99603 AC079328.2-201ENST00000561241 3354 ntBASIC13.18□□□□□ -0.3
TRGV9Q99603 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRGV9Q99603 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRGV9Q99603 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRGV9Q99603 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms