Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
S1PR3Q99500 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
S1PR3Q99500 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
S1PR3Q99500 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
S1PR3Q99500 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
S1PR3Q99500 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.99□□□□□ -0.17
S1PR3Q99500 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
S1PR3Q99500 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.99□□□□□ -0.17
S1PR3Q99500 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
S1PR3Q99500 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
S1PR3Q99500 AP005117.1-201ENST00000584346 1413 ntBASIC13.98□□□□□ -0.17
S1PR3Q99500 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
S1PR3Q99500 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.98□□□□□ -0.17
S1PR3Q99500 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
S1PR3Q99500 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.98□□□□□ -0.17
S1PR3Q99500 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
S1PR3Q99500 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.98□□□□□ -0.17
S1PR3Q99500 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
S1PR3Q99500 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
S1PR3Q99500 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.98□□□□□ -0.17
S1PR3Q99500 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
S1PR3Q99500 DUSP5P1-201ENST00000441325 1139 ntBASIC13.98□□□□□ -0.17
S1PR3Q99500 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.98□□□□□ -0.17
S1PR3Q99500 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.98□□□□□ -0.17
S1PR3Q99500 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.98□□□□□ -0.17
S1PR3Q99500 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
S1PR3Q99500 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
S1PR3Q99500 FRMD8P1-201ENST00000440433 1524 ntBASIC13.98□□□□□ -0.17
S1PR3Q99500 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
S1PR3Q99500 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
S1PR3Q99500 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
S1PR3Q99500 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
S1PR3Q99500 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
S1PR3Q99500 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
S1PR3Q99500 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
S1PR3Q99500 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
S1PR3Q99500 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.97□□□□□ -0.17
S1PR3Q99500 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.97□□□□□ -0.17
S1PR3Q99500 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
S1PR3Q99500 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
S1PR3Q99500 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.97□□□□□ -0.17
S1PR3Q99500 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
S1PR3Q99500 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
S1PR3Q99500 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
S1PR3Q99500 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.97□□□□□ -0.17
S1PR3Q99500 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.97□□□□□ -0.17
S1PR3Q99500 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.97□□□□□ -0.17
S1PR3Q99500 RBM17P3-201ENST00000417687 1192 ntBASIC13.97□□□□□ -0.17
S1PR3Q99500 LINC00982-205ENST00000420957 435 ntBASIC13.97□□□□□ -0.17
S1PR3Q99500 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.97□□□□□ -0.17
S1PR3Q99500 PRYP5-201ENST00000451909 266 ntBASIC13.97□□□□□ -0.17
S1PR3Q99500 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.97□□□□□ -0.17
S1PR3Q99500 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
S1PR3Q99500 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.97□□□□□ -0.17
S1PR3Q99500 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
S1PR3Q99500 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
S1PR3Q99500 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
S1PR3Q99500 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
S1PR3Q99500 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.97□□□□□ -0.17
S1PR3Q99500 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.97□□□□□ -0.17
S1PR3Q99500 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
S1PR3Q99500 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
S1PR3Q99500 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
S1PR3Q99500 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
S1PR3Q99500 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.96□□□□□ -0.17
S1PR3Q99500 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
S1PR3Q99500 AL021920.2-201ENST00000624828 1351 ntBASIC13.96□□□□□ -0.17
S1PR3Q99500 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.96□□□□□ -0.17
S1PR3Q99500 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
S1PR3Q99500 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms