Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC85AQ96PX6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.89■□□□□ 0.94
CCDC85AQ96PX6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC85AQ96PX6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.89■□□□□ 0.94
CCDC85AQ96PX6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CCDC85AQ96PX6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC85AQ96PX6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC85AQ96PX6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.89■□□□□ 0.94
CCDC85AQ96PX6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC85AQ96PX6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CCDC85AQ96PX6 WASH6P-202ENST00000359512 1437 ntBASIC20.89■□□□□ 0.94
CCDC85AQ96PX6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC85AQ96PX6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CCDC85AQ96PX6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 CYP2A7P1-201ENST00000595391 815 ntBASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CCDC85AQ96PX6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 AC005332.8-201ENST00000622750 2735 ntBASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC85AQ96PX6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 AC139713.2-201ENST00000641328 2723 ntBASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 AC026150.2-201ENST00000564693 1156 ntBASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC85AQ96PX6 AC008677.1-201ENST00000519230 1561 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms