Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.9■□□□□ 0.46
CALR3Q96L12 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.9■□□□□ 0.46
CALR3Q96L12 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.9■□□□□ 0.46
CALR3Q96L12 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CALR3Q96L12 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CALR3Q96L12 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CALR3Q96L12 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CALR3Q96L12 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CALR3Q96L12 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.9■□□□□ 0.46
CALR3Q96L12 AC104819.1-201ENST00000504587 486 ntBASIC17.9■□□□□ 0.46
CALR3Q96L12 AC012615.1-201ENST00000565797 1299 ntBASIC17.9■□□□□ 0.46
CALR3Q96L12 AL353135.1-201ENST00000606729 504 ntBASIC17.9■□□□□ 0.46
CALR3Q96L12 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CALR3Q96L12 AC012183.1-201ENST00000625197 499 ntBASIC17.9■□□□□ 0.46
CALR3Q96L12 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CALR3Q96L12 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CALR3Q96L12 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CALR3Q96L12 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.9■□□□□ 0.46
CALR3Q96L12 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CALR3Q96L12 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.9■□□□□ 0.46
CALR3Q96L12 AL590787.1-201ENST00000568856 1315 ntBASIC17.9■□□□□ 0.46
CALR3Q96L12 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CALR3Q96L12 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CALR3Q96L12 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CALR3Q96L12 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CALR3Q96L12 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CALR3Q96L12 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CALR3Q96L12 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CALR3Q96L12 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CALR3Q96L12 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CALR3Q96L12 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CALR3Q96L12 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CALR3Q96L12 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.89■□□□□ 0.45
CALR3Q96L12 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 LINC00265-3P-201ENST00000447588 903 ntBASIC17.89■□□□□ 0.45
CALR3Q96L12 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.89■□□□□ 0.45
CALR3Q96L12 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.89■□□□□ 0.45
CALR3Q96L12 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.89■□□□□ 0.45
CALR3Q96L12 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.89■□□□□ 0.45
CALR3Q96L12 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.89■□□□□ 0.45
CALR3Q96L12 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.89■□□□□ 0.45
CALR3Q96L12 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CALR3Q96L12 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CALR3Q96L12 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CALR3Q96L12 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CALR3Q96L12 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CALR3Q96L12 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.89■□□□□ 0.45
CALR3Q96L12 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CALR3Q96L12 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CALR3Q96L12 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
CALR3Q96L12 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.89■□□□□ 0.45
CALR3Q96L12 TCAF2P1-201ENST00000291129 2421 ntBASIC17.89■□□□□ 0.45
CALR3Q96L12 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
CALR3Q96L12 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CALR3Q96L12 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.89■□□□□ 0.45
CALR3Q96L12 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CALR3Q96L12 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CALR3Q96L12 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CALR3Q96L12 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CALR3Q96L12 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.88■□□□□ 0.45
CALR3Q96L12 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CALR3Q96L12 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CALR3Q96L12 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CALR3Q96L12 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CALR3Q96L12 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CALR3Q96L12 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CALR3Q96L12 PCED1CP-201ENST00000419887 785 ntBASIC17.88■□□□□ 0.45
CALR3Q96L12 AC074051.2-201ENST00000565115 352 ntBASIC17.88■□□□□ 0.45
CALR3Q96L12 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CALR3Q96L12 MIR5100-201ENST00000579544 119 ntBASIC17.88■□□□□ 0.45
CALR3Q96L12 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.88■□□□□ 0.45
CALR3Q96L12 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
CALR3Q96L12 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CALR3Q96L12 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CALR3Q96L12 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CALR3Q96L12 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CALR3Q96L12 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CALR3Q96L12 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CALR3Q96L12 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CALR3Q96L12 AC008741.2-201ENST00000612792 3115 ntBASIC17.88■□□□□ 0.45
CALR3Q96L12 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.88■□□□□ 0.45
CALR3Q96L12 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CALR3Q96L12 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CALR3Q96L12 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms