Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 AC254562.1-201ENST00000417586 456 ntBASIC15.3■□□□□ 0.04
LRRC46Q96FV0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 DNAJB3-202ENST00000449667 1266 ntBASIC15.3■□□□□ 0.04
LRRC46Q96FV0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 AC097637.2-201ENST00000624096 1997 ntBASIC15.3■□□□□ 0.04
LRRC46Q96FV0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC46Q96FV0 FLJ38576-201ENST00000623820 2459 ntBASIC15.29■□□□□ 0.04
LRRC46Q96FV0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 AC009336.1-201ENST00000608941 1553 ntBASIC15.29■□□□□ 0.04
LRRC46Q96FV0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC46Q96FV0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRRC46Q96FV0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC46Q96FV0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRRC46Q96FV0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC46Q96FV0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.28■□□□□ 0.04
LRRC46Q96FV0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC46Q96FV0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC46Q96FV0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC46Q96FV0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC46Q96FV0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC46Q96FV0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.28■□□□□ 0.04
LRRC46Q96FV0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.28■□□□□ 0.04
LRRC46Q96FV0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms