Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 TSEN15P1-201ENST00000423257 515 ntBASIC17.69■□□□□ 0.42
USP13Q92995 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.69■□□□□ 0.42
USP13Q92995 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.69■□□□□ 0.42
USP13Q92995 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
USP13Q92995 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
USP13Q92995 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.69■□□□□ 0.42
USP13Q92995 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.69■□□□□ 0.42
USP13Q92995 AC022145.2-201ENST00000598203 171 ntBASIC17.69■□□□□ 0.42
USP13Q92995 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP13Q92995 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
USP13Q92995 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
USP13Q92995 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP13Q92995 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
USP13Q92995 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.69■□□□□ 0.42
USP13Q92995 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP13Q92995 AL138688.1-201ENST00000624851 1594 ntBASIC17.69■□□□□ 0.42
USP13Q92995 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.69■□□□□ 0.42
USP13Q92995 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
USP13Q92995 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
USP13Q92995 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP13Q92995 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP13Q92995 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP13Q92995 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP13Q92995 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.68■□□□□ 0.42
USP13Q92995 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 AC124067.4-201ENST00000519691 2379 ntBASIC17.68■□□□□ 0.42
USP13Q92995 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.68■□□□□ 0.42
USP13Q92995 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.68■□□□□ 0.42
USP13Q92995 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.68■□□□□ 0.42
USP13Q92995 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
USP13Q92995 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.68■□□□□ 0.42
USP13Q92995 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
USP13Q92995 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.68■□□□□ 0.42
USP13Q92995 ADH5P3-201ENST00000433842 1137 ntBASIC17.68■□□□□ 0.42
USP13Q92995 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.68■□□□□ 0.42
USP13Q92995 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.68■□□□□ 0.42
USP13Q92995 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.68■□□□□ 0.42
USP13Q92995 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.68■□□□□ 0.42
USP13Q92995 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP13Q92995 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.68■□□□□ 0.42
USP13Q92995 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.68■□□□□ 0.42
USP13Q92995 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
USP13Q92995 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
USP13Q92995 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
USP13Q92995 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 TNRC18P3-201ENST00000441896 2691 ntBASIC17.67■□□□□ 0.42
USP13Q92995 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
USP13Q92995 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 AC002056.1-201ENST00000395613 760 ntBASIC17.67■□□□□ 0.42
USP13Q92995 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.67■□□□□ 0.42
USP13Q92995 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
USP13Q92995 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.67■□□□□ 0.42
USP13Q92995 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.67■□□□□ 0.42
USP13Q92995 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
USP13Q92995 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.67■□□□□ 0.42
USP13Q92995 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.67■□□□□ 0.42
USP13Q92995 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.67■□□□□ 0.42
USP13Q92995 AC093028.1-201ENST00000622998 982 ntBASIC17.67■□□□□ 0.42
USP13Q92995 AL645728.2-201ENST00000641974 660 ntBASIC17.67■□□□□ 0.42
USP13Q92995 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.67■□□□□ 0.42
USP13Q92995 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 AC141586.5-201ENST00000624546 2050 ntBASIC17.67■□□□□ 0.42
USP13Q92995 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP13Q92995 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms