Protein–RNA interactions for Protein: Q8WYL5

SSH1, Protein phosphatase Slingshot homolog 1, humanhuman

Predictions only

Length 1,049 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1Q8WYL5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 AC012569.1-201ENST00000591191 1524 ntBASIC21.52■■□□□ 1.04
SSH1Q8WYL5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 HCG4-201ENST00000418983 998 ntBASIC21.52■■□□□ 1.04
SSH1Q8WYL5 MED15P5-201ENST00000423150 992 ntBASIC21.52■■□□□ 1.04
SSH1Q8WYL5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 AC004877.2-201ENST00000623941 599 ntBASIC21.52■■□□□ 1.04
SSH1Q8WYL5 AC092865.6-201ENST00000642101 219 ntBASIC21.52■■□□□ 1.04
SSH1Q8WYL5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSH1Q8WYL5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
SSH1Q8WYL5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
SSH1Q8WYL5 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SSH1Q8WYL5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 KRT18P3-201ENST00000451602 1288 ntBASIC21.51■■□□□ 1.03
SSH1Q8WYL5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 SIGLEC29P-201ENST00000599873 1114 ntBASIC21.51■■□□□ 1.03
SSH1Q8WYL5 FAM197Y3-203ENST00000618346 717 ntBASIC21.51■■□□□ 1.03
SSH1Q8WYL5 AL513190.1-201ENST00000621254 727 ntBASIC21.51■■□□□ 1.03
SSH1Q8WYL5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 KRT8P39-201ENST00000396270 1433 ntBASIC21.51■■□□□ 1.03
SSH1Q8WYL5 AC025580.3-201ENST00000617932 1424 ntBASIC21.51■■□□□ 1.03
SSH1Q8WYL5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSH1Q8WYL5 AC090340.1-201ENST00000620778 4980 ntBASIC21.51■■□□□ 1.03
SSH1Q8WYL5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSH1Q8WYL5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 HLA-J-202ENST00000469281 1241 ntBASIC21.49■■□□□ 1.03
SSH1Q8WYL5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 KRT19P2-202ENST00000557173 1012 ntBASIC21.49■■□□□ 1.03
SSH1Q8WYL5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC21.49■■□□□ 1.03
SSH1Q8WYL5 BCAR1-209ENST00000546196 1340 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms