Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 CR392039.1-201ENST00000623217 204 ntBASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC142086.5-202ENST00000562500 217 ntBASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC025279.2-201ENST00000569730 653 ntBASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 MIR4640-201ENST00000581824 90 ntBASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC006001.1-201ENST00000325130 474 ntBASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 RN7SL396P-201ENST00000471086 295 ntBASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC011247.3-201ENST00000603297 438 ntBASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC091544.8-201ENST00000619490 361 ntBASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC006453.1-201ENST00000636037 1257 ntBASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AL805961.1-201ENST00000642026 753 ntBASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 AC134312.5-201ENST00000568031 1313 ntBASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC6.68□□□□□ -1.34
SYNE2Q8WXH0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 PRSS30P-206ENST00000641773 873 ntBASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AL158211.5-201ENST00000623583 2518 ntBASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 WASH7P-201ENST00000488147 1351 ntBASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 MYLKP1-201ENST00000509077 1580 ntBASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 AC007881.3-201ENST00000608897 607 ntBASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SYNE2Q8WXH0 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms