Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATL1Q8WXF7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 AC011676.5-201ENST00000624864 2660 ntBASIC16.53■□□□□ 0.24
ATL1Q8WXF7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 AC018712.1-201ENST00000455767 687 ntBASIC16.53■□□□□ 0.24
ATL1Q8WXF7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 TP73-AS1-207ENST00000624167 988 ntBASIC16.53■□□□□ 0.24
ATL1Q8WXF7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATL1Q8WXF7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 AC105339.3-201ENST00000560043 636 ntBASIC16.52■□□□□ 0.24
ATL1Q8WXF7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATL1Q8WXF7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.52■□□□□ 0.23
ATL1Q8WXF7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATL1Q8WXF7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATL1Q8WXF7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ATL1Q8WXF7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATL1Q8WXF7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
ATL1Q8WXF7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
ATL1Q8WXF7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATL1Q8WXF7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
ATL1Q8WXF7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.52■□□□□ 0.23
ATL1Q8WXF7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 RPS15P9-201ENST00000494093 319 ntBASIC16.51■□□□□ 0.23
ATL1Q8WXF7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATL1Q8WXF7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms