Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AL513190.1-201ENST00000621254 727 ntBASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
FNDC9Q8TBE3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 BCAR1-209ENST00000546196 1340 ntBASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 FAM185BP-201ENST00000443595 716 ntBASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 AC010327.4-202ENST00000591484 748 ntBASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 AC004877.2-201ENST00000623941 599 ntBASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FNDC9Q8TBE3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
FNDC9Q8TBE3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.21■□□□□ 0.02
FNDC9Q8TBE3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FNDC9Q8TBE3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 AC129492.6-201ENST00000611383 1305 ntBASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 MIR1233-2-201ENST00000408138 82 ntBASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 MIR1233-1-201ENST00000408722 82 ntBASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 RHOQP3-201ENST00000437982 621 ntBASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 DNAJB3-201ENST00000446806 729 ntBASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 GPALPP1-207ENST00000611650 899 ntBASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 ACTL9-202ENST00000612068 1252 ntBASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 AC006538.3-201ENST00000612495 578 ntBASIC15.2■□□□□ 0.02
FNDC9Q8TBE3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms