Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC060834.1-201ENST00000443027 2032 ntBASIC18.12■□□□□ 0.49
BEST2Q8NFU1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 AC254562.1-201ENST00000417586 456 ntBASIC18.12■□□□□ 0.49
BEST2Q8NFU1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 AP002490.2-201ENST00000524791 560 ntBASIC18.11■□□□□ 0.49
BEST2Q8NFU1 AL009183.1-201ENST00000603760 355 ntBASIC18.11■□□□□ 0.49
BEST2Q8NFU1 AL031055.1-201ENST00000606362 631 ntBASIC18.11■□□□□ 0.49
BEST2Q8NFU1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.11■□□□□ 0.49
BEST2Q8NFU1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 AC106820.2-201ENST00000563775 3264 ntBASIC18.1■□□□□ 0.49
BEST2Q8NFU1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 AP001094.4-201ENST00000579008 2176 ntBASIC18.1■□□□□ 0.49
BEST2Q8NFU1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 RNU1-129P-201ENST00000384064 167 ntBASIC18.1■□□□□ 0.49
BEST2Q8NFU1 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 AC109635.5-201ENST00000533593 962 ntBASIC18.1■□□□□ 0.49
BEST2Q8NFU1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 U1.21-201ENST00000580816 167 ntBASIC18.1■□□□□ 0.49
BEST2Q8NFU1 AC013467.2-201ENST00000605472 835 ntBASIC18.1■□□□□ 0.49
BEST2Q8NFU1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.1■□□□□ 0.49
BEST2Q8NFU1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 AC006277.1-201ENST00000624348 1610 ntBASIC18.09■□□□□ 0.49
BEST2Q8NFU1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 PCDHB17P-201ENST00000539533 2393 ntBASIC18.09■□□□□ 0.49
BEST2Q8NFU1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms