Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AL035252.4-201ENST00000624174 288 ntBASIC20.67■□□□□ 0.9
RTL9Q8NET4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTL9Q8NET4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTL9Q8NET4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL9Q8NET4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL9Q8NET4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTL9Q8NET4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTL9Q8NET4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
RTL9Q8NET4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 KRT18P34-201ENST00000488218 1270 ntBASIC20.66■□□□□ 0.9
RTL9Q8NET4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
RTL9Q8NET4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RTL9Q8NET4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 FO538757.1-201ENST00000623083 1397 ntBASIC20.65■□□□□ 0.9
RTL9Q8NET4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 BASP1P1-201ENST00000430708 665 ntBASIC20.65■□□□□ 0.9
RTL9Q8NET4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 MIR6080-201ENST00000617359 66 ntBASIC20.65■□□□□ 0.9
RTL9Q8NET4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTL9Q8NET4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTL9Q8NET4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTL9Q8NET4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTL9Q8NET4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
RTL9Q8NET4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTL9Q8NET4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RTL9Q8NET4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RTL9Q8NET4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTL9Q8NET4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTL9Q8NET4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTL9Q8NET4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL9Q8NET4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 AC005034.1-201ENST00000426657 489 ntBASIC20.64■□□□□ 0.89
RTL9Q8NET4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTL9Q8NET4 TSPY16P-201ENST00000449843 468 ntBASIC20.64■□□□□ 0.89
RTL9Q8NET4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.64■□□□□ 0.89
RTL9Q8NET4 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms