Protein–RNA interactions for Protein: Q8N9B4

ANKRD42, Ankyrin repeat domain-containing protein 42, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42Q8N9B4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ANKRD42Q8N9B4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ANKRD42Q8N9B4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ANKRD42Q8N9B4 MTHFR-217ENST00000641820 1569 ntBASIC17.11■□□□□ 0.33
ANKRD42Q8N9B4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.11■□□□□ 0.33
ANKRD42Q8N9B4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 AL135999.2-201ENST00000622438 1686 ntBASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 AC092384.3-202ENST00000564646 2873 ntBASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 AC007967.3-201ENST00000434308 558 ntBASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 AC141257.4-201ENST00000634557 245 ntBASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 AC136944.6-201ENST00000634818 245 ntBASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.1■□□□□ 0.33
ANKRD42Q8N9B4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 HLA-F-220ENST00000434407 884 ntBASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 AC067930.6-201ENST00000623257 4947 ntBASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ANKRD42Q8N9B4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ANKRD42Q8N9B4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
ANKRD42Q8N9B4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ANKRD42Q8N9B4 ME2P1-201ENST00000426028 1970 ntBASIC17.08■□□□□ 0.33
ANKRD42Q8N9B4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
ANKRD42Q8N9B4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.08■□□□□ 0.33
ANKRD42Q8N9B4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.08■□□□□ 0.32
ANKRD42Q8N9B4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ANKRD42Q8N9B4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.08■□□□□ 0.32
ANKRD42Q8N9B4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ANKRD42Q8N9B4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ANKRD42Q8N9B4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.08■□□□□ 0.32
ANKRD42Q8N9B4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ANKRD42Q8N9B4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.08■□□□□ 0.32
ANKRD42Q8N9B4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms